STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA98403.1Hypothetical protein. (86 aa)    
Predicted Functional Partners:
APA98402.1
Protoporphyrinogen IX dehydrogenase (menaquinone); KEGG: tra:Trad_1634 menaquinone-dependent protoporphyrinogen oxidase.
 
     0.809
APA98401.1
Putative NAD(P)H nitroreductase acg; Belongs to the nitroreductase family.
 
     0.698
APA98404.1
Uncharacterized protein.
       0.466
APA95314.1
Hypothetical protein.
  
     0.461
APB00682.1
Mediates copper resistance by sequestration of copper in the periplasm along with the copper-binding protein CopC. May have oxidase activity. Belongs to the multicopper oxidase family. CopA subfamily.
 
     0.457
APA98350.1
Protoporphyrinogen IX dehydrogenase (menaquinone); KEGG: nbr:O3I_018085 menaquinone-dependent protoporphyrinogen oxidase.
  
     0.435
APA94662.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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