STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ntpAH(+)-transporting two-sector ATPase; Involved in ATP-driven sodium extrusion. Belongs to the ATPase alpha/beta chains family; KEGG: kal:KALB_4145 V/A-type H+-transporting ATPase subunit A. (574 aa)    
Predicted Functional Partners:
APA98430.1
Hypothetical protein.
 
 0.999
atpB
V-type proton ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
 
0.999
APA98433.1
Hypothetical protein.
  
 0.999
APA98435.1
The C chain is a proteolipid, and one of the membranous subunits of the nonenzymatic component of the Sul-ATPase complex; Belongs to the V-ATPase proteolipid subunit family.
 
 0.999
APA98436.1
V-type ATP synthase subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
APA98434.1
Hypothetical protein.
  
 0.998
APA99997.1
F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Key component of the F(0) channe; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subuni [...]
  
 0.988
atpE
ATP synthase subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.988
ppa
Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
   
 
 0.940
APA98437.1
Hypothetical protein.
       0.817
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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