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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA98449.1Putative membrane-associated 30 kDa protein, chloroplastic; Belongs to the PspA/IM30 family. (246 aa)    
Predicted Functional Partners:
APA98448.1
Hypothetical protein.
 
     0.956
APA98446.1
Hypothetical protein.
 
     0.923
APB01450.1
Hypothetical protein.
  
 
 0.877
APB01482.1
Hypothetical protein.
  
 
 0.877
htpX-2
Protease HtpX like protein; Belongs to the peptidase M48B family; KEGG: say:TPY_0152 heat shock protein HtpX; Metalloendopeptidases.
 
    0.760
APA95104.1
Hypothetical protein.
 
  
 0.698
APB00692.1
Hypothetical protein.
 
  
 0.649
APA95851.1
Flotillin-1; May act as a scaffolding protein within caveolar membranes, functionally participating in formation of caveolae or caveolae-like vesicles; Belongs to the band 7/mec-2 family. Flotillin subfamily.
 
  
 0.573
APA94636.1
Hypothetical protein.
 
  
 0.530
APA98450.1
Hypothetical protein.
       0.527
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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