Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APA98452.1 | APA98453.1 | NS506_04404 | NS506_04405 | Alpha,alpha-trehalose phosphorylase; Belongs to the glycosyl hydrolase 65 family; KEGG: stp:Strop_0438 alpha,alpha-trehalose phosphorylase. | Hypothetical protein. | 0.786 |
APA98452.1 | APA98454.1 | NS506_04404 | NS506_04406 | Alpha,alpha-trehalose phosphorylase; Belongs to the glycosyl hydrolase 65 family; KEGG: stp:Strop_0438 alpha,alpha-trehalose phosphorylase. | Hypothetical protein. | 0.432 |
APA98453.1 | APA98452.1 | NS506_04405 | NS506_04404 | Hypothetical protein. | Alpha,alpha-trehalose phosphorylase; Belongs to the glycosyl hydrolase 65 family; KEGG: stp:Strop_0438 alpha,alpha-trehalose phosphorylase. | 0.786 |
APA98453.1 | APA98454.1 | NS506_04405 | NS506_04406 | Hypothetical protein. | Hypothetical protein. | 0.432 |
APA98454.1 | APA98452.1 | NS506_04406 | NS506_04404 | Hypothetical protein. | Alpha,alpha-trehalose phosphorylase; Belongs to the glycosyl hydrolase 65 family; KEGG: stp:Strop_0438 alpha,alpha-trehalose phosphorylase. | 0.432 |
APA98454.1 | APA98453.1 | NS506_04406 | NS506_04405 | Hypothetical protein. | Hypothetical protein. | 0.432 |
APA98454.1 | APA98455.1 | NS506_04406 | NS506_04407 | Hypothetical protein. | Spore coat protein; Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily; KEGG: mav:MAV_1024 null; Hexosyltransferases. | 0.432 |
APA98455.1 | APA98454.1 | NS506_04407 | NS506_04406 | Spore coat protein; Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily; KEGG: mav:MAV_1024 null; Hexosyltransferases. | Hypothetical protein. | 0.432 |