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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA98470.1Hypothetical protein. (417 aa)    
Predicted Functional Partners:
APA98471.1
Hypothetical protein.
       0.773
APA98481.1
Hypothetical protein.
       0.704
APA98472.1
Hypothetical protein.
       0.693
APA98473.1
Hypothetical protein.
       0.693
APA98474.1
Hypothetical protein.
       0.693
APA98475.1
Hypothetical protein.
       0.693
APA98476.1
Hypothetical protein.
       0.693
APA98477.1
Hypothetical protein.
       0.693
APA98478.1
Could be part of an ABC transporter complex; Belongs to the MlaE permease family.
       0.693
APA98479.1
Putative phospholipid ABC transporter permease protein MlaE; Part of the ABC transporter complex MlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane (By similarity); Belongs to the MlaE permease family.
       0.693
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.