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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA98488.1Terpentedienyl-diphosphate synthase; Involved in the production of the isoprenoid antibiotic terpentecin. Converts geranylgeranyl diphosphate (GGDP) into terpentedienol diphosphate (TDP) by a protonation-initiated cyclisation; Belongs to the terpene synthase family. (521 aa)    
Predicted Functional Partners:
mvaD
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes; Belongs to the diphosphomevalonate decarboxylase family; KEGG: lla:L9089 diphosphomevalonate decarboxylase.
  
 
 0.777
APA96716.1
Hypothetical protein.
  
   
 0.772
APA94497.1
Hypothetical protein.
  
     0.729
agmO
Glyceryl-ether monooxygenase that cleaves the O-alkyl bond of ether lipids. Ether lipids are essential components of brain membranes; Belongs to the sterol desaturase family. TMEM195 subfamily; KEGG: dfa:DFA_08160 alkylglycerol monooxygenase.
   
 
 0.723
APA98020.1
Glyceryl-ether monooxygenase that cleaves the O-alkyl bond of ether lipids. Ether lipids are essential components of brain membranes (By similarity); Belongs to the sterol desaturase family. TMEM195 subfamily; KEGG: cvr:CHLNCDRAFT_23445 alkylglycerol monooxygenase.
   
 
 0.723
APA97282.1
Hypothetical protein.
  
     0.685
APA95896.1
Hypothetical protein.
  
     0.674
idi
Isopentenyl-diphosphate Delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
  
  
 0.626
APA98097.1
Hypothetical protein.
   
 
 0.621
APA98609.1
Hypothetical protein.
  
     0.602
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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