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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA98534.1Protein anoxia up-regulated. (367 aa)    
Predicted Functional Partners:
APA95041.1
Hypothetical protein.
   
 
 0.809
APA96606.1
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.804
APA98504.1
Integrase/recombinase xerD like protein; Belongs to the 'phage' integrase family.
 
   
 0.786
APA97908.1
Hypothetical protein.
  
     0.649
fabA
3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length; Belongs to the thioester dehydratase family. FabA subfamily; KEGG: ype:YPO1430 3-hydroxyacyl-(acyl-carrier protein) dehydratase / trans-2-decenoyl-(acyl-carrier protein) isomerase.
 
     0.647
APA96860.1
Hypothetical protein.
  
     0.638
APA97775.1
Uncharacterized protein.
 
     0.624
APA95783.1
Hypothetical protein.
  
     0.610
APA94931.1
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.609
APA96423.1
Uncharacterized protein.
 
     0.595
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.