Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APA98630.1Hypothetical protein. (150 aa)    
Predicted Functional Partners:
APA98631.1
Hypothetical protein.
       0.565
APA98632.1
KEGG: ksk:KSE_19120 8-oxo-dGTP diphosphatase; Belongs to the Nudix hydrolase family.
       0.565
APB00608.1
UPF0173 metal-dependent hydrolase; Belongs to the UPF0173 family.
 
     0.511
APA97681.1
Hypothetical protein.
  
     0.485
APA98657.1
Uncharacterized protein.
 
     0.479
APA97660.1
Acyl-lipid (7-3)-desaturase, chloroplastic; Fatty acid desaturase that introduces a cis double bond at the 4-position in 16-carbon polyunsaturated fatty acids that contain a Delta(7) double bond, resulting in the production of 16 carbon fatty acid (7Z,10Z,13Z)-hexadeca-7,10,13-trienoate; Belongs to the fatty acid desaturase family; Contains 1 cytochrome b5 heme-binding domain; KEGG: cre:CHLREDRAFT_32523 fatty acid desaturase (delta-4 desaturase); With oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water.
  
     0.454
APA98549.1
Hypothetical protein.
  
     0.430
APA94343.1
Hypothetical protein.
  
     0.423
APA97109.1
Hypothetical protein.
  
     0.415
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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