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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA98668.1Alanine--glyoxylate transaminase; Soluble hydrogenase catalyzes both production and consumption of hydrogen from suitable artificial electron donors or acceptors. This subunit catalyzes the tritium-exchange activity. Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family; KEGG: pstt:CH92_05385 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase; overlaps another CDS with the same product name. (167 aa)    
Predicted Functional Partners:
agxT
Alanine--glyoxylate transaminase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family; KEGG: nbr:O3I_010440 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase; overlaps another CDS with the same product name.
 
     0.946
APA98669.1
Anaerobic glycerol-3-phosphate dehydrogenase subunit; Electron transfer protei; may also function as the membrane anchor for the GlpAB dimer; Contains 2 4Fe-4S ferredoxin-type domains.
 
  
 0.679
ftcD
Glutamate formimidoyltransferase; Required for both C1 and C2 metabolism. Belongs to the cyclodeaminase/cyclohydrolase family; KEGG: cjc:100408734 glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase.
 
  
 0.651
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family; Contains 1 ATP-grasp domain; KEGG: brh:RBRH_02487 phosphoribosylamine--glycine ligase.
  
  
 0.619
APA94919.1
Lactate 2-monooxygenase; Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family; Contains 1 FMN hydroxy acid dehydrogenase domain; KEGG: ccr:CC_1396 lactate 2-monooxygenase.
  
 0.599
APA96271.1
Putative transposase for insertion sequence element IS112; Involved in the transposition of the insertion sequence IS112 which inactivates the SalI restriction-modification system. Belongs to the transposase 11 family.
  
 0.599
APA96272.1
Putative transposase for insertion sequence element IS112; Involved in the transposition of the insertion sequence IS112 which inactivates the SalI restriction-modification system. Belongs to the transposase 11 family.
  
 0.599
APA98247.1
Lactate 2-monooxygenase; Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family; Contains 1 FMN hydroxy acid dehydrogenase domain; KEGG: mav:MAV_3747 lactate 2-monooxygenase.
  
 0.599
APB01126.1
Isopentenyl-diphosphate Delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP); Belongs to the IPP isomerase type 2 family; KEGG: nbr:O3I_007945 isopentenyl-diphosphate delta-isomerase.
  
 0.599
aarS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
  
 0.574
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
Server load: medium (48%) [HD]
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