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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA98796.1Hypothetical protein. (236 aa)    
Predicted Functional Partners:
APA98795.1
Hypothetical protein.
 
     0.848
APA98797.1
Hypothetical protein.
       0.757
APA99217.1
Uncharacterized protein; Contains 1 PAC (PAS-associated C-terminal) domain; Contains 1 PAS (PER-ARNT-SIM) domain; Contains 1 PPM-type phosphatase domain; Contains 1 STAS domain; KEGG: mmc:Mmcs_0350 null; Phosphotransferases with a nitrogenous group as acceptor.
  
 
 0.668
APA94403.1
Hypothetical protein.
 
 
 0.607
APA96172.1
Hypothetical protein.
     0.599
APA99618.1
Hypothetical protein.
 
 
 0.531
APA98065.1
Global regulatory protein for secondary metabolite formation. Belongs to the AfsR/DnrI/RedD regulatory family; Contains 1 NB-ARC domain; Contains 1 OmpR/PhoB-type DNA-binding domain; Contains 3 TPR repeats; overlaps another CDS with the same product name.
 
 
 0.529
APA99047.1
Hypothetical protein.
 
 
 0.489
APA95422.1
Hypothetical protein.
 
     0.466
APA99735.1
Uncharacterized protein; Cell membrane; Membrane; Plasmid; Transmembrane; Transmembrane helix.
  
     0.463
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.