STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA98827.1Hypothetical protein. (144 aa)    
Predicted Functional Partners:
APA98825.1
Hypothetical protein.
 
 
 0.978
APA98826.1
Hypothetical protein.
 
   
 0.950
APA98828.1
Hypothetical protein.
 
   
 0.950
APA98641.1
Hypothetical protein.
 
 
 0.917
APA95590.1
Hypothetical protein.
 
 
 0.908
APA96998.1
Hypothetical protein.
 
 
 0.908
APB01775.1
Hypothetical protein.
 
 
 0.908
APB01023.1
Hypothetical protein.
 
 
 0.903
APA98642.1
Hypothetical protein.
 
   
 0.790
APB01776.1
Peroxiredoxin; KEGG: msa:Mycsm_02692 peroxiredoxin Q/BCP.
 
   
 0.790
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.