close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA98839.1Hypothetical protein. (157 aa)    
Predicted Functional Partners:
APB00106.1
Long-chain-fatty-acid--AMP ligase FadD32; Catalyzes the activation of long-chain fatty acids as acyl-adenylates (acyl-AMP), which are then transferred to the multifunctional polyketide synthase (PKS) for further chain extension; Belongs to the ATP-dependent AMP-binding enzyme family.
 
   
 0.602
entF
Dimodular nonribosomal peptide synthase; Specifically adenylates threonine and glycine, and loads them onto their corresponding peptidyl carrier domains; Belongs to the ATP-dependent AMP-binding enzyme family; Contains 2 acyl carrier domains; KEGG: xcp:XCR_0420 enterobactin synthetase component F; Nucleotidyltransferases.
 
   
 0.571
APA98140.1
Hypothetical protein.
  
    0.527
mibS
2-methylisoborneol synthase; Catalyzes the cyclization of 2-methylgeranyl diphosphate (2-MeGPP) to 2-methylisoborneol (2-MIB), which likely involves the intermediacy of 2-methyllinalyl diphosphate; Belongs to the terpene synthase family. 2- methylisoborneol synthase subfamily; KEGG: nno:NONO_c25610 2-methylisoborneol synthase.
  
     0.527
APA96442.1
Dimodular nonribosomal peptide synthase; Specifically adenylates threonine and glycine, and loads them onto their corresponding peptidyl carrier domains; Belongs to the ATP-dependent AMP-binding enzyme family; Contains 2 acyl carrier domains; KEGG: nbr:O3I_034810 enterobactin synthetase component F; Nucleotidyltransferases.
 
   
 0.516
APA98139.1
Hypothetical protein.
  
     0.502
APA98840.1
Uncharacterized protein; To M. leprae ML2452.
       0.470
APB01629.1
Methionyl-tRNA formyltransferase; Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by: (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP; Belongs to the Fmt family; KEGG: mkn:MKAN_04875 methionyl-tRNA formyltransferase.
 
  
 0.469
APA98059.1
Chondramide synthase cmdD; Involved in the synthesis of chondramides. Activates R- beta-tyrosine and probably phenylalanine; Belongs to the ATP-dependent AMP-binding enzyme family; Contains 2 acyl carrier domains.
     
 0.440
APA99763.1
Major membrane protein; To M. leprae MmpI and Synechococcus PCC 7942 SrpI.
  
     0.414
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.