STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA98852.1Hypothetical protein. (280 aa)    
Predicted Functional Partners:
APA98034.1
Hypothetical protein.
 
     0.663
APA94420.1
Hypothetical protein.
  
    0.657
APA96864.1
Hypothetical protein.
  
     0.655
APA98851.1
Hypothetical protein.
   
   0.636
APA99609.1
Hypothetical protein.
  
     0.570
mibS
2-methylisoborneol synthase; Catalyzes the cyclization of 2-methylgeranyl diphosphate (2-MeGPP) to 2-methylisoborneol (2-MIB), which likely involves the intermediacy of 2-methyllinalyl diphosphate; Belongs to the terpene synthase family. 2- methylisoborneol synthase subfamily; KEGG: nno:NONO_c25610 2-methylisoborneol synthase.
  
   0.568
APA97346.1
Hypothetical protein.
  
 
   0.561
APB01347.1
Proteoglycan; Plays a role in boundary lubrication within articulating joints. Prevents protein deposition onto cartilage from synovial fluid by controlling adhesion-dependent synovial growth and inhibiting the adhesion of synovial cells to the cartilage surface; Contains 2 hemopexin repeats; Contains 2 SMB (somatomedin-B) domains.
  
     0.553
APB01039.1
Cutinase; KEGG: cter:A606_03065 cutinase.
  
    0.551
APA98009.1
HTH-type transcriptional repressor KstR; Controls the expression of genes used for utilizing diverse lipids as energy sources; Contains 1 HTH tetR-type DNA-binding domain.
  
 
   0.549
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.