STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA98996.1Belongs to the peptidase M1 family; KEGG: rha:RHA1_ro04381 aminopeptidase; Aminopeptidases. (451 aa)    
Predicted Functional Partners:
APA98995.1
Long-chain-fatty-acid--CoA ligase; Induces peptide synthesis, activates and incorporates five amino acids, forms a thiazoline ring between the first two amino acids and incoporates a D-glutamine in the fourth position. Belongs to the ATP-dependent AMP-binding enzyme family; Contains 5 acyl carrier domains; KEGG: mts:MTES_3293 long-chain acyl-CoA synthetase.
 
 
 0.955
dbpA
ATP-binding RNA helicase involved in 40S ribosomal subunit biogenesis and is required for the normal formation of 18S rRNAs through pre-rRNA processing at A0, A1 and A2 sites. Required for vegetative growth (By similarity); Belongs to the DEAD box helicase family. DDX49/DBP8 subfamily; Contains 1 helicase ATP-binding domain; Contains 1 helicase C-terminal domain; KEGG: vfu:vfu_A00697 ATP-independent RNA helicase DbpA.
  
 
 0.547
APA98994.1
Feruloyl esterase; Involved in degradation of plant cell walls. Hydrolyzes of the feruloyl-arabinose ester bond in arabinoxylans as well as the feruloyl-galactose and feruloyl-arabinose ester bonds in pectin (By similarity); Belongs to the feruloyl esterase type B family.
       0.487
rplJ
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.
   
 0.475
idh1
Isocitrate dehydrogenase (NADP(+)); May act as a corneal epithelial crystallin and may be involved in maintaining corneal epithelial transparency; Belongs to the isocitrate and isopropylmalate dehydrogenases family; KEGG: hdn:Hden_2121 isocitrate dehydrogenase.
    
 0.475
APA94267.1
Hypothetical protein.
 
   
 0.470
APA96651.1
Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent); This enzyme participates in both the breakdown and synthesis of glucose; Belongs to the phosphohexose mutase family; KEGG: nfa:nfa44530 phosphoglucomutase.
   
 0.470
APB01503.1
Hypothetical protein; Belongs to the peptidase S8 family.
 
 
 0.468
APA98140.1
Hypothetical protein.
    
 0.453
rplW
50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.
    
 0.451
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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