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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA99195.1Hypothetical protein. (397 aa)    
Predicted Functional Partners:
APA95929.1
Hypothetical protein.
 
    0.705
APA97631.1
Hypothetical protein.
 
     0.593
APA96680.1
Hypothetical protein.
  
     0.585
APA99414.1
Hypothetical protein.
  
     0.578
APA98133.1
Hypothetical protein.
 
     0.539
APA99887.1
Hypothetical protein.
 
     0.503
APA94420.1
Hypothetical protein.
  
     0.499
APA99194.1
Hypothetical protein.
       0.499
APA96860.1
Hypothetical protein.
  
     0.498
APB01347.1
Proteoglycan; Plays a role in boundary lubrication within articulating joints. Prevents protein deposition onto cartilage from synovial fluid by controlling adhesion-dependent synovial growth and inhibiting the adhesion of synovial cells to the cartilage surface; Contains 2 hemopexin repeats; Contains 2 SMB (somatomedin-B) domains.
  
    0.496
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.