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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA99207.1Hypothetical protein. (255 aa)    
Predicted Functional Partners:
APA99206.1
Hypothetical protein.
   
 
 0.505
APB01042.1
KEGG: ype:YPO0589 2,4-dienoyl-CoA reductase (NADPH2).
  
 0.500
APA99469.1
Ferredoxin--NAD(+) reductase; Part of the electron transfer component of benzene 1,2- dioxygenase, transfers electrons from ferredoxin to NADH. Belongs to the bacterial ring-hydroxylating dioxygenase ferredoxin reductase family; KEGG: sme:SMc00914 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
   
 0.480
APA99943.1
CoA-disulfide reductase; Catalyzes the four-electron reduction of molecular oxygen to water. Active on beta-NADH, but not on alpha-NADH, beta- NADPH or alpha-NADPH. Under aerobic conditions, oxygen acts as the electron acceptor. Under anaerobic conditions, DCIP and MB can replace oxygen as the electron acceptor; Belongs to the class-III pyridine nucleotide-disulfide oxidoreductase family; KEGG: shv:AAT16_03300 CoA-disulfide reductase.
   
 0.480
APB00531.1
Uncharacterized protein.
 
     0.444
APA96973.1
Hypothetical protein.
  
     0.420
APA96824.1
Peptidyl-dipeptidase Dcp; May play a specific role in the degradation of signal peptides after they are released from precursor forms of secreted proteins. Can cleave N-acetyl-L-Ala(4). Belongs to the peptidase M3 family; KEGG: kmi:VW41_10460 peptidyl-dipeptidase Dcp.
  
   0.405
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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