STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA99321.1Hypothetical protein. (169 aa)    
Predicted Functional Partners:
APA99320.1
Putative HTH-type transcriptional regulator; Contains 1 HTH cro/C1-type DNA-binding domain.
 
     0.901
APA99319.1
NADPH:quinone reductase; Contains 2 acyl carrier domains; KEGG: gbr:Gbro_2563 NADPH2:quinone reductase.
 
     0.830
APA99322.1
Cytochrome P450 monooxygenase PikC; Catalyzes the hydroxylation of narbomycin to give rise to pikromycin, and of 10-deoxymethymycin (YC-17) to give rise to methymycin and neomethymycin during macrolide antibiotic biosynthesis. In addition, produces low amounts of neopicromycin, novapikromycin and novamethymycin. Requires the participation of a ferredoxin and a ferredoxin reductase for the transfer of electrons from NADPH to the monooxygenase; Belongs to the cytochrome P450 family; KEGG: sen:SACE_0651 null; Acting on paired donors, with incorporation or reduction of molecular oxygen. Th [...]
       0.563
APA97537.1
Hypothetical protein.
  
     0.443
APA95057.1
Hypothetical protein.
  
     0.416
APB00333.1
Hypothetical protein.
  
     0.404
APA98123.1
Hypothetical protein.
  
     0.400
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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