Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APA94598.1 | APA99348.1 | NS506_00516 | NS506_05302 | Hypothetical protein. | Uncharacterized protein; To M. tuberculosis Rv2558. | 0.476 |
APA95271.1 | APA99348.1 | NS506_01198 | NS506_05302 | Hypothetical protein. | Uncharacterized protein; To M. tuberculosis Rv2558. | 0.461 |
APA95525.1 | APA99348.1 | NS506_01454 | NS506_05302 | Hypothetical protein. | Uncharacterized protein; To M. tuberculosis Rv2558. | 0.581 |
APA95745.1 | APA99348.1 | NS506_01676 | NS506_05302 | Hypothetical protein. | Uncharacterized protein; To M. tuberculosis Rv2558. | 0.446 |
APA97662.1 | APA99348.1 | NS506_03612 | NS506_05302 | Putative diacylated glycolipid transporter LprF; Might be involved in transporting short diacylated glycolipids to the cell outer membrane. Binds glycolipids that contain a diacylated glycerophosphate or a diacylated phosphatidylinositol moiety with C14 and C16 chains (upon overexpression in M. smegmati; M. smegmatis does not encode this gene). Overexpression in M. smegmatis increases the cell wall glycolipid LAM/LM ratio (lipoarabinomannan/lipomannan), suggesting perhaps this protein is involved in the preferential translocation of diacylated LAM to the outer cell membrane. Overexpres [...] | Uncharacterized protein; To M. tuberculosis Rv2558. | 0.528 |
APA98730.1 | APA99348.1 | NS506_04684 | NS506_05302 | Hypothetical protein. | Uncharacterized protein; To M. tuberculosis Rv2558. | 0.537 |
APA99348.1 | APA94598.1 | NS506_05302 | NS506_00516 | Uncharacterized protein; To M. tuberculosis Rv2558. | Hypothetical protein. | 0.476 |
APA99348.1 | APA95271.1 | NS506_05302 | NS506_01198 | Uncharacterized protein; To M. tuberculosis Rv2558. | Hypothetical protein. | 0.461 |
APA99348.1 | APA95525.1 | NS506_05302 | NS506_01454 | Uncharacterized protein; To M. tuberculosis Rv2558. | Hypothetical protein. | 0.581 |
APA99348.1 | APA95745.1 | NS506_05302 | NS506_01676 | Uncharacterized protein; To M. tuberculosis Rv2558. | Hypothetical protein. | 0.446 |
APA99348.1 | APA97662.1 | NS506_05302 | NS506_03612 | Uncharacterized protein; To M. tuberculosis Rv2558. | Putative diacylated glycolipid transporter LprF; Might be involved in transporting short diacylated glycolipids to the cell outer membrane. Binds glycolipids that contain a diacylated glycerophosphate or a diacylated phosphatidylinositol moiety with C14 and C16 chains (upon overexpression in M. smegmati; M. smegmatis does not encode this gene). Overexpression in M. smegmatis increases the cell wall glycolipid LAM/LM ratio (lipoarabinomannan/lipomannan), suggesting perhaps this protein is involved in the preferential translocation of diacylated LAM to the outer cell membrane. Overexpres [...] | 0.528 |
APA99348.1 | APA98730.1 | NS506_05302 | NS506_04684 | Uncharacterized protein; To M. tuberculosis Rv2558. | Hypothetical protein. | 0.537 |
APA99348.1 | APA99349.1 | NS506_05302 | NS506_05303 | Uncharacterized protein; To M. tuberculosis Rv2558. | Sn-glycerol-3-phosphate transport system permease protein UgpE; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family; Contains 1 ABC transmembrane type-1 domain. | 0.529 |
APA99348.1 | APA99350.1 | NS506_05302 | NS506_05304 | Uncharacterized protein; To M. tuberculosis Rv2558. | Probably part of a binding-protein-dependent transport system starch degradation products. Probably responsible for the translocation of the substrate across the membrane. Belongs to the binding-protein-dependent transport system permease family. MalFG subfamily; Contains 1 ABC transmembrane type-1 domain. | 0.511 |
APA99348.1 | APA99352.1 | NS506_05302 | NS506_05306 | Uncharacterized protein; To M. tuberculosis Rv2558. | Sn-glycerol-3-phosphate-binding periplasmic protein UgpB; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import; Belongs to the bacterial solute-binding protein 1 family. | 0.437 |
APA99348.1 | cpdA | NS506_05302 | NS506_05305 | Uncharacterized protein; To M. tuberculosis Rv2558. | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes. | 0.437 |
APA99349.1 | APA99348.1 | NS506_05303 | NS506_05302 | Sn-glycerol-3-phosphate transport system permease protein UgpE; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family; Contains 1 ABC transmembrane type-1 domain. | Uncharacterized protein; To M. tuberculosis Rv2558. | 0.529 |
APA99349.1 | APA99350.1 | NS506_05303 | NS506_05304 | Sn-glycerol-3-phosphate transport system permease protein UgpE; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family; Contains 1 ABC transmembrane type-1 domain. | Probably part of a binding-protein-dependent transport system starch degradation products. Probably responsible for the translocation of the substrate across the membrane. Belongs to the binding-protein-dependent transport system permease family. MalFG subfamily; Contains 1 ABC transmembrane type-1 domain. | 0.986 |
APA99349.1 | APA99352.1 | NS506_05303 | NS506_05306 | Sn-glycerol-3-phosphate transport system permease protein UgpE; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family; Contains 1 ABC transmembrane type-1 domain. | Sn-glycerol-3-phosphate-binding periplasmic protein UgpB; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import; Belongs to the bacterial solute-binding protein 1 family. | 0.971 |
APA99349.1 | cpdA | NS506_05303 | NS506_05305 | Sn-glycerol-3-phosphate transport system permease protein UgpE; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family; Contains 1 ABC transmembrane type-1 domain. | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes. | 0.735 |
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