STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA99436.1Lipopolysaccharide core biosynthesis glycosyltransferase LpsE; Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily; KEGG: bma:BMAA1705 null; Hexosyltransferases. (386 aa)    
Predicted Functional Partners:
glgB-2
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 0.732
APA99437.1
3-oxoacyl-[acyl-carrier-protein] reductase; Involved in the degradation of pyridoxine or pyridoxamine (free, phosphate-unbound, forms of vitamin B6). Oxidizes pyridoxal to 4-pyridoxolactone, but does not have activity toward pyridoxal 5'-phosphate, pyridoxine, pyridoxamine, pyridoxamine 5'-phosphate, 4-phthalaldehyde, 2-nitrobenzaldehyde, pyridine, formaldehyde, 2-carboxybenzaldehyde or sugars; Belongs to the short-chain dehydrogenases/reductases (SDR) family; KEGG: bpe:BP2554 3-oxoacyl-(acyl-carrier protein) reductase.
  
   0.659
algD
GDP-mannose 6-dehydrogenase; Involved in the assembly of a N-linked pentasaccharide that decorates the S-layer glycoprotein and flagellins. Involved in the biosynthesis of the hexuronic acids found at both positions 2 and 3 of the pentasaccharide; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family; KEGG: rhl:LPU83_pLPU83d1236 GDP-mannose 6-dehydrogenase.
 
  
 0.654
APA99438.1
Hypothetical protein.
  
    0.635
APA99416.1
Undecaprenyl-phosphate glucose phosphotransferase; Involved in the biosynthesis of the exopolysaccharide acetan, a water-soluble polysaccharide involved in production of bacterial cellulose (BC); Belongs to the bacterial sugar transferase family.
 
  
 0.627
APA96535.1
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase; Is likely the initiating enzyme for the K2 capsular polysaccharide synthesis. Catalyzes the transfer of the glucose-1- phosphate moiety from UDP-Glc onto the carrier lipid undecaprenyl phosphate (C55-P), forming a phosphoanhydride bond yielding to glucosyl-pyrophosphoryl-undecaprenol (Glc-PP-C55) (By similarity); Belongs to the bacterial sugar transferase family.
 
  
 0.625
APA99587.1
3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform; Belongs to the 3-beta-HSD family; Contains 1 reticulon domain.
 
  
 0.567
APA96544.1
Hypothetical protein.
 
 
 0.553
glf
UDP-galactopyranose mutase; Catalyzes the interconversion through a 2-keto intermediate of uridine diphosphogalactopyranose (UDP-GalP) into uridine diphosphogalactofuranose (UDP-GalF) which is a key building block for cell wall construction in Mycobacterium tuberculosis; Belongs to the UDP-galactopyranose/dTDP-fucopyranose mutase family; KEGG: nno:NONO_c01380 UDP-galactopyranose mutase.
  
  
 0.547
APA99435.1
Hypothetical protein.
       0.522
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.