STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APB00405.1Hypothetical protein. (442 aa)    
Predicted Functional Partners:
APA94928.1
Hypothetical protein.
  
     0.674
APA97725.1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Contains 1 acyl carrier domain.
  
     0.654
APA97805.1
Hypothetical protein.
  
     0.648
APA96441.1
Oxygen-dependent dichlorochromopyrrolate synthase; Involved in the biosynthesis of the indolocarbazole antitumor agent rebeccamycin. Catalyzes the oxygen-dependent dimerization of two L-tryptophan-derived molecules (imine form of indole 3-pyruvate (IPA)), to form dichlorochromopyrrolic acid (CPA), the precursor for the six-ring bisindolopyrrolocarbazole scaffold of the rebeccamycin. Under anaerobic conditions, the presence of hydrogen peroxide allows for the formation of CPA through the conversion of hydrogen peroxide to dioxygen, via the catalase activity of RebD. Due to the instabili [...]
 
     0.518
APB00404.1
Hypothetical protein.
       0.490
APB00406.1
Hypothetical protein.
       0.462
APA97775.1
Uncharacterized protein.
  
     0.433
APA98583.1
Required for transposition of transposon Tn21. Belongs to the transposase 7 family.
  
     0.425
APA98893.1
Hypothetical protein.
  
     0.423
APA96868.1
Hypothetical protein.
  
     0.421
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.