STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APB00830.1KEGG: sen:SACE_5066 non-specific serine/threonine protein kinase. (767 aa)    
Predicted Functional Partners:
APA97711.1
Transcriptional regulatory protein EmbR; Positively regulates the transcription of the embCAB operon. Exhibits ATPase and GTPase activities (By similarity); Belongs to the AfsR/DnrI/RedD regulatory family; Contains 1 FHA domain; Contains 1 OmpR/PhoB-type DNA-binding domain.
 
  
 0.647
barA
Histidine kinase; Member of the two-component regulatory system KdpD/KdpE involved in the regulation of the kdp operon; Contains 1 OmpR/PhoB-type DNA-binding domain; Contains 1 response regulatory domain; KEGG: gpb:HDN1F_09420 two-component system, NarL family, sensor histidine kinase BarA.
  
  
 0.597
APB00829.1
Hypothetical protein.
       0.553
APA98065.1
Global regulatory protein for secondary metabolite formation. Belongs to the AfsR/DnrI/RedD regulatory family; Contains 1 NB-ARC domain; Contains 1 OmpR/PhoB-type DNA-binding domain; Contains 3 TPR repeats; overlaps another CDS with the same product name.
  
 0.530
APB00552.1
Hypothetical protein.
  
  
 0.506
APA96898.1
Global regulatory protein for secondary metabolite formation. Belongs to the AfsR/DnrI/RedD regulatory family; Contains 1 NB-ARC domain; Contains 1 OmpR/PhoB-type DNA-binding domain; Contains 3 TPR repeats.
 
    0.501
APA95209.1
Adenylate cyclase; Acts as a positive transcriptional regulator of the molybdopterin biosynthesis moa1 locus, promoting the expression of the moaA1B1C1D1 genes; Belongs to the AfsR/DnrI/RedD regulatory family; Contains 1 OmpR/PhoB-type DNA-binding domain; KEGG: rrs:RoseRS_1638 adenylate cyclase.
    0.433
APA95944.1
Global regulatory protein for secondary metabolite formation. Belongs to the AfsR/DnrI/RedD regulatory family; Contains 1 NB-ARC domain; Contains 1 OmpR/PhoB-type DNA-binding domain; Contains 3 TPR repeats.
 
  
 0.400
APB01141.1
Transcriptional regulatory protein EmbR; Positively regulates the transcription of the embCAB operon. Exhibits ATPase and GTPase activities (By similarity); Belongs to the AfsR/DnrI/RedD regulatory family; Contains 1 FHA domain; Contains 1 OmpR/PhoB-type DNA-binding domain.
 
  
 0.400
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
Server load: low (20%) [HD]
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