STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APB01311.1Hypothetical protein. (181 aa)    
Predicted Functional Partners:
APB01310.1
Response regulator ArlR; Member of the two-component regulatory system ArlS/ArlR involved in the regulation of adhesion, autolysis, multidrug resistance and virulence; Contains 1 OmpR/PhoB-type DNA-binding domain; Contains 1 response regulatory domain.
       0.849
APB01309.1
Histidine kinase; KEGG: rrs:RoseRS_3736 two-component system, OmpR family, sensor kinase.
       0.685
APA95963.1
UPF0699 transmembrane protein YdbS; Belongs to the UPF0699 family.
  
  
 0.671
APA96013.1
Hypothetical protein.
  
  
 0.576
APB00160.1
35 kDa protein; Belongs to the PspA/IM30 family.
  
    0.540
APB01312.1
Stearoyl-[acyl-carrier-protein] 9-desaturase; Could be involved in mycobacterial fatty acid biosynthesis; Belongs to the fatty acid desaturase family; KEGG: mao:MAP4_1620 acyl-(acyl-carrier-protein) desaturase.
       0.519
APB00663.1
KEGG: nop:Nos7524_4710 malate dehydrogenase (oxaloacetate-decarboxylating).
 
    0.486
APA97223.1
Hypothetical protein.
  
     0.479
APA94562.1
Uncharacterized protein.
  
     0.473
APB00971.1
Uncharacterized protein; Isopeptide bond; Ubl conjugation.
  
    0.469
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.