STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APB01340.1Putative transposase for insertion sequence element IS5376; Involved in the transposition of the insertion sequence; Belongs to the transposase IS21/IS408/IS1162 family; Contains 1 HTH IS21-type DNA-binding domain; Contains 1 integrase catalytic domain. (491 aa)    
Predicted Functional Partners:
APB01339.1
Belongs to the IS21/IS1162 putative ATP-binding protein family.
 
  
 0.957
APA99798.1
Belongs to the IS21/IS1162 putative ATP-binding protein family.
 
  
 0.820
APB00994.1
Belongs to the IS21/IS1162 putative ATP-binding protein family.
 
  
 0.820
APA96309.1
Hypothetical protein.
 
     0.566
APA96310.1
Hypothetical protein.
 
     0.515
Your Current Organism:
Nocardia seriolae
NCBI taxonomy Id: 37332
Other names: ATCC 43993, CCUG 46828, CIP 104778, DSM 44129, IFO 15557, JCM 3360, N. seriolae, NBRC 15557
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.