STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP19Matrix metallopeptidase 19. (437 aa)    
Predicted Functional Partners:
TIMP2
TIMP metallopeptidase inhibitor 2.
    
 0.857
LYPLA1
Lysophospholipase 1.
 
   
  0.776
TIMP3
TIMP metallopeptidase inhibitor 3.
    
 0.772
NID1
Nidogen 1.
     
 0.716
TIMP4
TIMP metallopeptidase inhibitor 4.
    
 0.643
NID2
Nidogen 2.
     
 0.638
ENSTBEP00000004930
annotation not available
    
 0.625
HBEGF
Heparin binding EGF like growth factor.
    
 0.573
DCN
Decorin.
    
 0.533
PCSK5
Proprotein convertase subtilisin/kexin type 5.
    
 0.532
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.