STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGFOD22-oxoglutarate and iron dependent oxygenase domain containing 2. (350 aa)    
Predicted Functional Partners:
TRMT2A
tRNA methyltransferase 2 homolog A.
   
    0.728
ENSTBEP00000001464
annotation not available
     
 0.680
PRDM4
PR/SET domain 4.
     
 0.680
PRDM5
PR/SET domain 5.
     
 0.680
ENSTBEP00000011336
annotation not available
    
 0.661
ENSTBEP00000008424
annotation not available
    
  0.649
ENSTBEP00000002910
annotation not available
   
 0.617
COLGALT2
Collagen beta(1-O)galactosyltransferase 2.
   
 0.617
ENSTBEP00000007576
annotation not available
   
 0.617
ENSTBEP00000008205
annotation not available
   
 0.617
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.