STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1QTNF7C1q and TNF related 7. (209 aa)    
Predicted Functional Partners:
COL2A1
Collagen type II alpha 1 chain.
  
 0.740
COL3A1
Collagen type III alpha 1 chain.
  
 0.719
COL1A2
Collagen type I alpha 2 chain.
  
 
 0.707
COL5A2
Collagen type V alpha 2 chain.
  
 0.699
COL6A2
Collagen type VI alpha 2 chain.
  
 0.684
ENSTBEP00000002330
annotation not available
    
 0.636
ENSTBEP00000012312
annotation not available
    
 0.636
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
 0.615
ENSTBEP00000004421
annotation not available
  
 
  0.610
ENSTBEP00000003198
annotation not available
   
 0.609
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.