STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRRM1Serine and arginine repetitive matrix 1. (911 aa)    
Predicted Functional Partners:
ENSTBEP00000005475
annotation not available
   
 0.988
ENSTBEP00000000450
annotation not available
    
 0.987
ENSTBEP00000009134
annotation not available
   
 0.984
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
    
 0.971
ENSTBEP00000014932
annotation not available
    
 0.971
CDC40
Cell division cycle 40.
    
 0.968
RNPS1
RNA binding protein with serine rich domain 1.
   
 0.967
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
    
 
 0.966
ENSTBEP00000011139
annotation not available
    
 0.966
ENSTBEP00000013333
annotation not available
   
 0.966
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.