STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX7Sorting nexin 7. (387 aa)    
Predicted Functional Partners:
VPS35
VPS35 retromer complex component.
   
 
 0.911
VPS29
VPS29 retromer complex component.
    
 
 0.900
ENSTBEP00000001248
annotation not available
   
 0.883
SNX5
Sorting nexin 5.
   
 0.874
BLOC1S2
Biogenesis of lysosomal organelles complex 1 subunit 2.
    
 
 0.791
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
    
 0.770
IGF2R
Insulin like growth factor 2 receptor.
    
 0.744
VAMP1
Vesicle associated membrane protein 1.
    
 0.739
ENSTBEP00000004263
annotation not available
    
 0.739
VPS26B
VPS26, retromer complex component B.
    
 
 0.729
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.