STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDRGK1DDRGK domain containing 1. (315 aa)    
Predicted Functional Partners:
CDK5RAP3
CDK5 regulatory subunit associated protein 3.
    
 
 0.975
UFL1
UFM1 specific ligase 1.
    
 
 0.962
UFC1
Ubiquitin-fold modifier conjugating enzyme 1.
    
 
 0.801
LMAN1
Lectin, mannose binding 1.
    
  0.652
RHOA
Ras homolog family member A.
    
  0.643
UFSP2
UFM1 specific peptidase 2.
    
 
 0.620
ENSTBEP00000001660
annotation not available
    
  0.615
RHOB
Ras homolog family member B.
    
  0.615
PLCXD3
Phosphatidylinositol specific phospholipase C X domain containing 3.
 
      0.606
LMAN1L
Lectin, mannose binding 1 like.
    
  0.596
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.