STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSM3LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)    
Predicted Functional Partners:
LSM2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.999
LSM5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.997
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.996
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.995
ENSTBEP00000011442
annotation not available
   
 0.995
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.993
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.992
LSM1
LSM1 homolog, mRNA degradation associated.
   
 0.992
ENSTBEP00000012308
annotation not available
   
 0.989
ENSTBEP00000015110
annotation not available
   
 0.989
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.