Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1orf116Chromosome 1 open reading frame 116. (586 aa)    
Predicted Functional Partners:
HOMER1
Homer scaffold protein 1.
    
   0.955
ENSTBEP00000005677
annotation not available
    
   0.829
HOMER2
Homer scaffold protein 2.
    
   0.679
ENSTBEP00000001986
annotation not available
      
 0.586
INIP
INTS3 and NABP interacting protein.
      
 0.567
PRR15L
Proline rich 15 like.
      
 0.563
C9orf152
Chromosome 9 open reading frame 152.
      
 0.563
PAK1IP1
PAK1 interacting protein 1.
      
 0.468
SCEL
Sciellin.
   
  
 0.461
SPSB1
splA/ryanodine receptor domain and SOCS box containing 1.
      
 0.431
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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