STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL21A1Collagen type XXI alpha 1 chain. (959 aa)    
Predicted Functional Partners:
ENSTBEP00000004734
annotation not available
    
0.752
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.723
ENSTBEP00000003198
annotation not available
   
 0.688
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
 0.669
SERPINH1
Serpin family H member 1.
    
 0.648
ENSTBEP00000002330
annotation not available
    
 0.636
ENSTBEP00000012312
annotation not available
    
 0.636
STK17B
Serine/threonine kinase 17b.
    
 0.625
ENSTBEP00000004421
annotation not available
    
0.618
COL8A1
Collagen type VIII alpha 1 chain.
  
 
0.595
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.