STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIT1tRNA isopentenyltransferase 1. (474 aa)    
Predicted Functional Partners:
MTHFR
Methylenetetrahydrofolate reductase.
    
 0.905
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
  
  
 0.862
PDSS2
Decaprenyl diphosphate synthase subunit 2.
  
 
 0.854
ENSTBEP00000006664
annotation not available
  
  
 0.844
ENSTBEP00000010044
annotation not available
  
 
 0.844
YBEY
ybeY metalloendoribonuclease.
  
  
 0.790
ENSTBEP00000004732
annotation not available
    
 0.766
ENSTBEP00000009452
annotation not available
    
 0.766
RUSC1
RUN and SH3 domain containing 1.
    
 0.766
ENSTBEP00000000980
annotation not available
    
 0.736
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.