Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMTNSmoothelin. (945 aa)    
Predicted Functional Partners:
FAM171A1
Family with sequence similarity 171 member A1.
      
 0.887
ADGRA3
Adhesion G protein-coupled receptor A3.
      
 0.887
CAMKK1
Calcium/calmodulin dependent protein kinase kinase 1.
      
 0.864
ENSTBEP00000006303
annotation not available
     
 0.821
KDM6B
Lysine demethylase 6B.
      
 0.786
MYH11
Myosin heavy chain 11.
   
 0.750
MYOCD
Myocardin.
   
 
 0.726
MYO10
Myosin X.
     
 0.703
RAPGEF1
Rap guanine nucleotide exchange factor 1.
    
   0.696
MYO3B
Myosin IIIB.
     
 0.690
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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