Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MSGN1Mesogenin 1. (139 aa)    
Predicted Functional Partners:
TCF12
Transcription factor 12.
    
 0.763
TCF4
Transcription factor 4.
    
 0.763
ID1
Inhibitor of DNA binding 1, HLH protein.
    
 0.760
ID2
Inhibitor of DNA binding 2.
    
 0.731
ATP11B
ATPase phospholipid transporting 11B (putative).
    
   0.687
LDB1
LIM domain binding 1.
    
 0.625
LDB2
LIM domain binding 2.
    
 0.625
GNPDA1
Glucosamine-6-phosphate deaminase 1.
      
 0.575
ENSTBEP00000005616
annotation not available
    
 0.569
ENSTBEP00000000652
annotation not available
   
 0.561
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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