STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF133Ring finger protein 133. (376 aa)    
Predicted Functional Partners:
OTUB1
OTU deubiquitinase, ubiquitin aldehyde binding 1.
    
 0.784
USP8
Ubiquitin specific peptidase 8.
    
 0.722
OTUB2
OTU deubiquitinase, ubiquitin aldehyde binding 2.
    
 0.698
ENSTBEP00000014757
annotation not available
    
 0.674
USP2
Ubiquitin specific peptidase 2.
    
 0.594
USP21
Ubiquitin specific peptidase 21.
    
 0.594
ENSTBEP00000003983
annotation not available
    
  0.582
USP37
Ubiquitin specific peptidase 37.
    
 0.447
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
    
 0.447
ENSTBEP00000013893
annotation not available
    
 0.447
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.