STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTBEP00000001212annotation not available (318 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
     
 0.981
ENSTBEP00000009134
annotation not available
   
 
 0.914
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
    
 
 0.907
CDC5L
Cell division cycle 5 like.
   
   0.895
U2AF2
U2 small nuclear RNA auxiliary factor 2.
    
 
 0.828
SF1
Splicing factor 1.
    
 
 0.826
DDX46
DEAD-box helicase 46.
   
 
 0.800
SF3B3
Splicing factor 3b subunit 3.
    
 
 0.762
ENSTBEP00000003495
annotation not available
   
 0.750
RNF40
Ring finger protein 40.
   
 0.750
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.