STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P4HTMProlyl 4-hydroxylase, transmembrane. (464 aa)    
Predicted Functional Partners:
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
   0.737
SECISBP2
SECIS binding protein 2.
    
 0.635
ENSTBEP00000001793
annotation not available
    
 0.635
PDIA3
Protein disulfide isomerase family A member 3.
    
 0.635
PDIA4
Protein disulfide isomerase family A member 4.
    
 0.635
TXNDC11
Thioredoxin domain containing 11.
    
 0.635
ENSTBEP00000012079
annotation not available
    
 0.635
ENSTBEP00000000314
annotation not available
     
 0.630
ENSTBEP00000015101
annotation not available
    
 0.559
ENSTBEP00000007614
annotation not available
    
 
 0.527
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.