STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HINFPHistone H4 transcription factor. (429 aa)    
Predicted Functional Partners:
GSC
Goosecoid homeobox.
    
   0.948
TAF8
TATA-box binding protein associated factor 8.
   
    0.694
ENSTBEP00000008073
annotation not available
   
    0.692
NPAT
Nuclear protein, coactivator of histone transcription.
    
 
 0.621
ZNF318
Zinc finger protein 318.
      
 0.512
DCTN2
Dynactin subunit 2.
      
 0.510
LSM10
LSM10, U7 small nuclear RNA associated.
      
 0.504
E2F7
E2F transcription factor 7.
      
 0.483
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
      
 0.468
LETM1
Leucine zipper and EF-hand containing transmembrane protein 1.
      
 0.416
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.