STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAMPLimbic system associated membrane protein. (306 aa)    
Predicted Functional Partners:
ENSTBEP00000011630
annotation not available
    
 0.599
SLIT2
Slit guidance ligand 2.
    
 0.549
SIGLECL1
SIGLEC family like 1.
 
  
 
 0.548
CD47
CD47 molecule.
    
  0.548
IGLON5
IgLON family member 5.
    
 
0.545
PTPN11
Protein tyrosine phosphatase non-receptor type 11.
    
  0.528
ENSTBEP00000011255
annotation not available
    
  0.527
NYX
Nyctalopin.
    
 0.525
SLIT3
Slit guidance ligand 3.
    
 0.525
EGFLAM
EGF like, fibronectin type III and laminin G domains.
    
 0.519
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.