STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITRM1Pitrilysin metallopeptidase 1. (1036 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
    
 
 0.951
PDHA1
Pyruvate dehydrogenase E1 alpha 1 subunit.
   
   0.857
APLP2
Amyloid beta precursor like protein 2.
    
 
 0.843
ATF6
Activating transcription factor 6.
   
    0.780
ATP5F1B
ATP synthase F1 subunit beta.
    
  0.683
DLD
Dihydrolipoamide dehydrogenase.
   
 
 0.669
CDCA8
Cell division cycle associated 8.
    
  0.656
ENSTBEP00000004617
annotation not available
    
 
 0.641
PDHB
Pyruvate dehydrogenase E1 beta subunit.
   
   0.639
ENSTBEP00000002219
annotation not available
  
 
  0.634
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.