STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPIL4Peptidylprolyl isomerase like 4. (467 aa)    
Predicted Functional Partners:
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.917
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.915
CDC40
Cell division cycle 40.
   
 0.895
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
   
0.893
SRRM1
Serine and arginine repetitive matrix 1.
    
 0.852
MTREX
Mtr4 exosome RNA helicase.
   
  0.845
CCDC12
Coiled-coil domain containing 12.
    
 0.844
DDX39B
DExD-box helicase 39B.
  
 0.838
ENSTBEP00000011139
annotation not available
     
 0.831
SF3A1
Splicing factor 3a subunit 1.
   
 0.829
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.