STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF168Ring finger protein 168. (569 aa)    
Predicted Functional Partners:
ENSTBEP00000003983
annotation not available
    
  0.981
TP53BP1
Tumor protein p53 binding protein 1.
    
 0.975
ENSTBEP00000010809
annotation not available
    
 0.963
PAXIP1
PAX interacting protein 1.
   
 0.880
ENSTBEP00000011274
annotation not available
    
 0.878
ENSTBEP00000003547
annotation not available
    
 
 0.865
BARD1
BRCA1 associated RING domain 1.
    
 0.832
MRE11
MRE11 homolog, double strand break repair nuclease.
   
 0.827
UIMC1
Ubiquitin interaction motif containing 1.
     
 0.825
ATM
ATM serine/threonine kinase.
     
 0.815
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.