STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMBR1LLimb development membrane protein 1 like. (488 aa)    
Predicted Functional Partners:
IHH
Indian hedgehog signaling molecule.
 
   
 0.742
LRP2
LDL receptor related protein 2.
    
  0.730
PTCH2
Patched 2.
     
 0.707
ENSTBEP00000006048
annotation not available
    
 
 0.593
DHH
Desert hedgehog signaling molecule.
 
   
 0.544
ENSTBEP00000010324
annotation not available
      
 0.512
CIB1
Calcium and integrin binding 1.
      
 0.509
PDGFRB
Platelet derived growth factor receptor beta.
      
 0.485
LRP4
LDL receptor related protein 4.
    
  0.470
PDE3A
Phosphodiesterase 3A.
   
 
 0.468
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.