STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHD7Chromodomain helicase DNA binding protein 7. (2728 aa)    
Predicted Functional Partners:
ARID4B
AT-rich interaction domain 4B.
   
 0.804
ARID4A
AT-rich interaction domain 4A.
   
 0.800
FANCM
FA complementation group M.
    
 0.759
CTNNB1
Catenin beta 1.
   
 0.753
POLR2C
RNA polymerase II subunit C.
   
 0.752
ACTR5
Actin related protein 5.
    
 0.741
SSRP1
Structure specific recognition protein 1.
    
 
 0.719
PCNA
Proliferating cell nuclear antigen.
  
 0.705
ENSTBEP00000004786
annotation not available
    
 0.704
POLR2D
RNA polymerase II subunit D.
    
 0.704
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.