STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTBEP00000001465annotation not available (234 aa)    
Predicted Functional Partners:
RBM24
RNA binding motif protein 24.
 
  
   0.938
ENSTBEP00000002850
annotation not available
  
 
 0.826
ENSTBEP00000007944
annotation not available
  
 
 0.822
SF3B5
Splicing factor 3b subunit 5.
     
 0.626
SF3B1
Splicing factor 3b subunit 1.
     
 0.610
SF3B3
Splicing factor 3b subunit 3.
     
 0.608
ENSTBEP00000010198
annotation not available
     
 0.592
DDX42
DEAD-box helicase 42.
    
  0.588
ELAVL4
ELAV like RNA binding protein 4.
  
   
 0.575
ELAVL3
ELAV like RNA binding protein 3.
  
   
 0.573
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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