STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPSF1Cleavage and polyadenylation specific factor 1. (1185 aa)    
Predicted Functional Partners:
SYMPK
Symplekin.
    
 0.999
CPSF2
Cleavage and polyadenylation specific factor 2.
   
 0.999
WDR33
WD repeat domain 33.
    
 0.999
ENSTBEP00000000704
annotation not available
    
 0.998
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.997
ENSTBEP00000006796
annotation not available
   
 0.997
WDR82
WD repeat domain 82.
    
 0.996
CSTF3
Cleavage stimulation factor subunit 3.
   
 0.993
PCF11
PCF11 cleavage and polyadenylation factor subunit.
    
 0.992
SSU72
SSU72 homolog, RNA polymerase II CTD phosphatase.
    
 0.991
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.