STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX35DEAH-box helicase 35. (703 aa)    
Predicted Functional Partners:
CDC40
Cell division cycle 40.
   
 0.968
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.964
SLU7
SLU7 homolog, splicing factor.
    
 0.964
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.961
ENSTBEP00000005475
annotation not available
    
 0.955
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.929
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
    
 0.926
ENSTBEP00000012308
annotation not available
   
 0.926
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 0.925
ENSTBEP00000000403
annotation not available
   
 0.922
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.