STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPM5Transient receptor potential cation channel subfamily M member 5. (1091 aa)    
Predicted Functional Partners:
NUDT9
Nudix hydrolase 9.
 
   
 0.930
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
    
  0.756
PPP1CC
Protein phosphatase 1 catalytic subunit gamma.
    
  0.756
PLCB2
Phospholipase C beta 2.
    
 
 0.598
TRPV6
Transient receptor potential cation channel subfamily V member 6.
     
 0.574
ENSTBEP00000004019
annotation not available
      
 0.563
TRPM2
Transient receptor potential cation channel subfamily M member 2.
     
0.547
TRPA1
Transient receptor potential cation channel subfamily A member 1.
     
 0.543
TRPV2
Transient receptor potential cation channel subfamily V member 2.
     
 0.534
TRPC1
Transient receptor potential cation channel subfamily C member 1.
    
 0.529
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.