STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALHM5Calcium homeostasis modulator family member 5. (306 aa)    
Predicted Functional Partners:
C1orf109
Chromosome 1 open reading frame 109.
   
    0.652
ENSTBEP00000001456
annotation not available
   
    0.554
CWC25
CWC25 spliceosome associated protein homolog.
   
    0.539
ENSTBEP00000013287
annotation not available
   
    0.461
LIX1
Limb and CNS expressed 1.
   
    0.436
LIX1L
Limb and CNS expressed 1 like.
   
    0.436
ACOT12
acyl-CoA thioesterase 12.
   
    0.426
ACOT11
acyl-CoA thioesterase 11.
   
    0.426
ENSTBEP00000000792
annotation not available
   
    0.408
THAP6
THAP domain containing 6.
   
    0.408
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.